PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938316.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 240aa    MW: 27204.6 Da    PI: 4.5671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938316.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-1160102754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       Er+RR+++N+++  Lr ++P+      +K++Ka+i + A+ YI++L
  XP_022938316.1  60 VSERNRRKKLNDRLIALRAVVPNI-----TKMDKASIIKDAIVYIQEL 102
                     57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDNILDEYLK YWETDMFLLT EDSGSGGWGL EEAFYSAYNS SSPDGKVSPS SPSEASKNIV  60
SERNRRKKLN DRLIALRAVV PNITKMDKAS IIKDAIVYIQ ELRAEEKRIE TEISDLESSV  120
NNNGSRTTNQ WNDENGDRIW TNMKWNRQTT DASSSSSIEV LDLSVNYVGE KVMVVSLTCL  180
RRGNTILKVW EVIESLKLKI ITANISVFAN KLLNTLFIEA EREEEEELKV QIETAIAHMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-61bHLH family protein