PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938419.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 440aa MW: 48997.1 Da PI: 7.7991

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938419.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	50	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_022938419.1 50 RERWKDEEHDKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 94 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKDEEHDK 60 FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSNGCSTNLV GCIEIPPPRP 120 KRKPAHPYPR KEVAHSHKLS SISEQTSSLS PQLSEKECQS PTSTVVAATS GSDTLMFANS 180 RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFTKDDM HEKDDSTKEP 240 SLQSLKLFGR TVLISDPHKQ TPTIETCSSK ADSKPGENQK QISPRKSPTG NPESTWNHGA 300 FYFIQLNNVD SNQGSGSTVP VSWWSSYGSY PLSFVHCFNQ AHSNPSREVD DREAHKDQSW 360 CGSNTGSLNS GENDIQSSSS RVFQNRDEMI GKALSCELIS SHEKNTKGFV PYKRCMTERA 420 TQSHTVTDTE REEKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKDEEHDK  60
FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSNGCSTNLV GCIEIPPPRP  120
KRKPAHPYPR KEVAHSHKLS SISEQTSSLS PQLSEKECQS PTSTVVAATS GSDTLMFANS  180
RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFTKDDM HEKDDSTKEP  240
SLQSLKLFGR TVLISDPHKQ TPTIETCSSK ADSKPGENQK QISPRKSPTG NPESTWNHGA  300
FYFIQLNNVD SNQGSGSTVP VSWWSSYGSY PLSFVHCFNQ AHSNPSREVD DREAHKDQSW  360
CGSNTGSLNS GENDIQSSSS RVFQNRDEMI GKALSCELIS SHEKNTKGFV PYKRCMTERA  420
TQSHTVTDTE REEKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-43	MYB_related family protein