PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938422.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1398aa MW: 153855 Da PI: 7.2921

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938422.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	970	1010	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av +G++ ++ I+ ++g ++ qck ++ XP_022938422.1 970 YWTDGEKSLFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 1010 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1398 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT 180 NQRRDREYSV SSSGWKPLKW TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP 240 QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST 300 HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS 360 GFENQYEGTS PVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS 420 KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV 480 TSANTISKPM EHSTSDLEEV HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV 540 DNNMIIKSEG VTLEPVSSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK 600 LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK 660 SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSSPQIKQY 720 RTTLKMPALI LDQKDKMASR FISNNGLVEN PCAVEKERAM INPWSSEEKD VFMEKLECFG 780 KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKVKSTSNYL MTTGKKWNSE 840 ANAASLDMLG AAMVRAHKYS SSRSGGRTAY RTTQFDDDLS ERAKSFHGFG NEREKVAADV 900 LAGICGSLSS EALGSCVTSN FNRGDGSQDL KCKKGGATTV LRRRITNNVP QCVDDEIFSD 960 ESCGEMDPSY WTDGEKSLFI EAVSVYGKNF SMISTHVGSK STDQCKVFFS KARKCLGLDV 1020 LCSAKKMPED GNGHGVNGGD CEAGVDTKDA FPCKRVSSQM VDDLPKSVTC ISGGETESKN 1080 LQSIHLEVKE SNPSSKTCSN AAVDAMVSDD ACNRKDGFLS GFDDDCQSVN STHDKNGLVL 1140 EQRHAVVSDE IAKEQGISAL VAALVGNDSN AETKRVSVDT SSDRSDKAHS HTADNSSMPL 1200 NAHVSSLSKE EQGCHHVRVH SRSLSDSEQS SRNGDLKLFG QILTHSSSVP SSKSGSSENG 1260 NRTELHHKLK CRLKVNSHGN LITAKFDRKN SSGQEEDAPS RSYGFWDGSR MRTGFSSLPD 1320 PTTLLSRYPT FDHCSKTASL IEQQPICNGQ KSNSNQMSEV NSSKEGIIVG KNCNDDDDED 1380 ASDTKLHCNK AAEGGGGS

Sequence ? help Back to Top

Protein Sequence Length: 1398 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT  180
NQRRDREYSV SSSGWKPLKW TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP  240
QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST  300
HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS  360
GFENQYEGTS PVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS  420
KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV  480
TSANTISKPM EHSTSDLEEV HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV  540
DNNMIIKSEG VTLEPVSSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK  600
LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK  660
SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSSPQIKQY  720
RTTLKMPALI LDQKDKMASR FISNNGLVEN PCAVEKERAM INPWSSEEKD VFMEKLECFG  780
KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKVKSTSNYL MTTGKKWNSE  840
ANAASLDMLG AAMVRAHKYS SSRSGGRTAY RTTQFDDDLS ERAKSFHGFG NEREKVAADV  900
LAGICGSLSS EALGSCVTSN FNRGDGSQDL KCKKGGATTV LRRRITNNVP QCVDDEIFSD  960
ESCGEMDPSY WTDGEKSLFI EAVSVYGKNF SMISTHVGSK STDQCKVFFS KARKCLGLDV  1020
LCSAKKMPED GNGHGVNGGD CEAGVDTKDA FPCKRVSSQM VDDLPKSVTC ISGGETESKN  1080
LQSIHLEVKE SNPSSKTCSN AAVDAMVSDD ACNRKDGFLS GFDDDCQSVN STHDKNGLVL  1140
EQRHAVVSDE IAKEQGISAL VAALVGNDSN AETKRVSVDT SSDRSDKAHS HTADNSSMPL  1200
NAHVSSLSKE EQGCHHVRVH SRSLSDSEQS SRNGDLKLFG QILTHSSSVP SSKSGSSENG  1260
NRTELHHKLK CRLKVNSHGN LITAKFDRKN SSGQEEDAPS RSYGFWDGSR MRTGFSSLPD  1320
PTTLLSRYPT FDHCSKTASL IEQQPICNGQ KSNSNQMSEV NSSKEGIIVG KNCNDDDDED  1380
ASDTKLHCNK AAEGGGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-122	MYB family protein