PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938423.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1397aa MW: 153784 Da PI: 7.2921

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938423.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	969	1009	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av +G++ ++ I+ ++g ++ qck ++ XP_022938423.1 969 YWTDGEKSLFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 1009 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1397 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT 180 NQRRDREYSV SSSGWKPLKW TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP 240 QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST 300 HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS 360 GFENQYEGTS PVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS 420 KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV 480 TSANTISKPM EHSTSDLEEV HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV 540 DNNMIIKSEG VTLEPVSSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK 600 LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK 660 SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP GNLNHPVSNA EILKHMSMQL SSSPQIKQYR 720 TTLKMPALIL DQKDKMASRF ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLECFGK 780 DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA 840 NAASLDMLGA AMVRAHKYSS SRSGGRTAYR TTQFDDDLSE RAKSFHGFGN EREKVAADVL 900 AGICGSLSSE ALGSCVTSNF NRGDGSQDLK CKKGGATTVL RRRITNNVPQ CVDDEIFSDE 960 SCGEMDPSYW TDGEKSLFIE AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL 1020 CSAKKMPEDG NGHGVNGGDC EAGVDTKDAF PCKRVSSQMV DDLPKSVTCI SGGETESKNL 1080 QSIHLEVKES NPSSKTCSNA AVDAMVSDDA CNRKDGFLSG FDDDCQSVNS THDKNGLVLE 1140 QRHAVVSDEI AKEQGISALV AALVGNDSNA ETKRVSVDTS SDRSDKAHSH TADNSSMPLN 1200 AHVSSLSKEE QGCHHVRVHS RSLSDSEQSS RNGDLKLFGQ ILTHSSSVPS SKSGSSENGN 1260 RTELHHKLKC RLKVNSHGNL ITAKFDRKNS SGQEEDAPSR SYGFWDGSRM RTGFSSLPDP 1320 TTLLSRYPTF DHCSKTASLI EQQPICNGQK SNSNQMSEVN SSKEGIIVGK NCNDDDDEDA 1380 SDTKLHCNKA AEGGGGS

Sequence ? help Back to Top

Protein Sequence Length: 1397 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT  180
NQRRDREYSV SSSGWKPLKW TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP  240
QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST  300
HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS  360
GFENQYEGTS PVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS  420
KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV  480
TSANTISKPM EHSTSDLEEV HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV  540
DNNMIIKSEG VTLEPVSSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK  600
LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK  660
SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP GNLNHPVSNA EILKHMSMQL SSSPQIKQYR  720
TTLKMPALIL DQKDKMASRF ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLECFGK  780
DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA  840
NAASLDMLGA AMVRAHKYSS SRSGGRTAYR TTQFDDDLSE RAKSFHGFGN EREKVAADVL  900
AGICGSLSSE ALGSCVTSNF NRGDGSQDLK CKKGGATTVL RRRITNNVPQ CVDDEIFSDE  960
SCGEMDPSYW TDGEKSLFIE AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL  1020
CSAKKMPEDG NGHGVNGGDC EAGVDTKDAF PCKRVSSQMV DDLPKSVTCI SGGETESKNL  1080
QSIHLEVKES NPSSKTCSNA AVDAMVSDDA CNRKDGFLSG FDDDCQSVNS THDKNGLVLE  1140
QRHAVVSDEI AKEQGISALV AALVGNDSNA ETKRVSVDTS SDRSDKAHSH TADNSSMPLN  1200
AHVSSLSKEE QGCHHVRVHS RSLSDSEQSS RNGDLKLFGQ ILTHSSSVPS SKSGSSENGN  1260
RTELHHKLKC RLKVNSHGNL ITAKFDRKNS SGQEEDAPSR SYGFWDGSRM RTGFSSLPDP  1320
TTLLSRYPTF DHCSKTASLI EQQPICNGQK SNSNQMSEVN SSKEGIIVGK NCNDDDDEDA  1380
SDTKLHCNKA AEGGGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-120	MYB family protein