PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938424.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1378aa MW: 151567 Da PI: 7.3395

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938424.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.5e-08	950	990	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av +G++ ++ I+ ++g ++ qck ++ XP_022938424.1 950 YWTDGEKSLFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 990 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1378 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRDKVKGQHD KVDDVNGLGT NQRRDREYSV SSSGWKPLKW 180 TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP QNLSPSADSA ECAMSSLPYD 240 EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST HSLNSSLIEK GPRCSGFSDR 300 TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS GFENQYEGTS PVEKLNDFSI 360 AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS KVLETTESEI DLLENELKGL 420 ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV TSANTISKPM EHSTSDLEEV 480 HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV DNNMIIKSEG VTLEPVSSDI 540 YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK LDIWSTNAFS QNQCLVKERF 600 AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK SQKKYQLSLW TNYSGYQKNR 660 SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSSPQIKQY RTTLKMPALI LDQKDKMASR 720 FISNNGLVEN PCAVEKERAM INPWSSEEKD VFMEKLECFG KDFGKIASFL DHKTTADCIE 780 FYYKNHKSDC FEKTKKLEFG KKVKSTSNYL MTTGKKWNSE ANAASLDMLG AAMVRAHKYS 840 SSRSGGRTAY RTTQFDDDLS ERAKSFHGFG NEREKVAADV LAGICGSLSS EALGSCVTSN 900 FNRGDGSQDL KCKKGGATTV LRRRITNNVP QCVDDEIFSD ESCGEMDPSY WTDGEKSLFI 960 EAVSVYGKNF SMISTHVGSK STDQCKVFFS KARKCLGLDV LCSAKKMPED GNGHGVNGGD 1020 CEAGVDTKDA FPCKRVSSQM VDDLPKSVTC ISGGETESKN LQSIHLEVKE SNPSSKTCSN 1080 AAVDAMVSDD ACNRKDGFLS GFDDDCQSVN STHDKNGLVL EQRHAVVSDE IAKEQGISAL 1140 VAALVGNDSN AETKRVSVDT SSDRSDKAHS HTADNSSMPL NAHVSSLSKE EQGCHHVRVH 1200 SRSLSDSEQS SRNGDLKLFG QILTHSSSVP SSKSGSSENG NRTELHHKLK CRLKVNSHGN 1260 LITAKFDRKN SSGQEEDAPS RSYGFWDGSR MRTGFSSLPD PTTLLSRYPT FDHCSKTASL 1320 IEQQPICNGQ KSNSNQMSEV NSSKEGIIVG KNCNDDDDED ASDTKLHCNK AAEGGGGS

Sequence ? help Back to Top

Protein Sequence Length: 1378 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSTSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNGRESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRDKVKGQHD KVDDVNGLGT NQRRDREYSV SSSGWKPLKW  180
TRSGALSSCT STSGHSSSTR IAGALDSNEA KSEIVLKNAP QNLSPSADSA ECAMSSLPYD  240
EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST HSLNSSLIEK GPRCSGFSDR  300
TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPSS GFENQYEGTS PVEKLNDFSI  360
AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLIYKKEIS KVLETTESEI DLLENELKGL  420
ISDSKGYFSF PLASRSFLEG EKYFEEKNDV TNTVATLPVV TSANTISKPM EHSTSDLEEV  480
HADVKGKDRS GRLDVKESVI TKENLTISDC SSEDNVVASV DNNMIIKSEG VTLEPVSSDI  540
YEFADEKGDS VLDLILASNK ESACKASEAL TRLLPANERK LDIWSTNAFS QNQCLVKERF  600
AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK SQKKYQLSLW TNYSGYQKNR  660
SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSSPQIKQY RTTLKMPALI LDQKDKMASR  720
FISNNGLVEN PCAVEKERAM INPWSSEEKD VFMEKLECFG KDFGKIASFL DHKTTADCIE  780
FYYKNHKSDC FEKTKKLEFG KKVKSTSNYL MTTGKKWNSE ANAASLDMLG AAMVRAHKYS  840
SSRSGGRTAY RTTQFDDDLS ERAKSFHGFG NEREKVAADV LAGICGSLSS EALGSCVTSN  900
FNRGDGSQDL KCKKGGATTV LRRRITNNVP QCVDDEIFSD ESCGEMDPSY WTDGEKSLFI  960
EAVSVYGKNF SMISTHVGSK STDQCKVFFS KARKCLGLDV LCSAKKMPED GNGHGVNGGD  1020
CEAGVDTKDA FPCKRVSSQM VDDLPKSVTC ISGGETESKN LQSIHLEVKE SNPSSKTCSN  1080
AAVDAMVSDD ACNRKDGFLS GFDDDCQSVN STHDKNGLVL EQRHAVVSDE IAKEQGISAL  1140
VAALVGNDSN AETKRVSVDT SSDRSDKAHS HTADNSSMPL NAHVSSLSKE EQGCHHVRVH  1200
SRSLSDSEQS SRNGDLKLFG QILTHSSSVP SSKSGSSENG NRTELHHKLK CRLKVNSHGN  1260
LITAKFDRKN SSGQEEDAPS RSYGFWDGSR MRTGFSSLPD PTTLLSRYPT FDHCSKTASL  1320
IEQQPICNGQ KSNSNQMSEV NSSKEGIIVG KNCNDDDDED ASDTKLHCNK AAEGGGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-122	MYB family protein