PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938447.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 725aa MW: 81206.3 Da PI: 4.5219

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938447.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.3e-11	572	615	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +W++ + e++++av+q+G++ + I + ++ gRt+ q+k+++ + XP_022938447.1 572 RTKWSKHDTERFYEAVRQFGTD-FCMIQQLFP-GRTRHQIKLKFKN 615 789*****************.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDGRG 60 NTKSIKSSSQ LPVIEENKES EDDLLLATVD STQLDLDSCG GILPSGSTID GPVGVENPTD 120 DSKNSGILNY SHSSASRAHE ATVLGQSGLG SIQPEDGHSN DGKIAGQNTD VFDELEWLDD 180 FHNQPKNEAD PSSLKQATIS NEDGDLDTQR LEVEECGAGA NITRDIISSG TTTPSEQPAC 240 KYIPKPKMRV AGDSCTQISQ PEISNTLPPS PQVISCDTRC MHEASIGTHS DGVLNDSSIN 300 FDDYSPVNQH IEAPVNVESL AYDSYGDILV DDFNSDDQDE MLREEGGKNG EEDPLSQSNM 360 SQQQEMFPPV GEEIDHSKTS RKLRQQVSHQ LDDPEDGVDD FPSERFSNYD IHGDGYKKNG 420 RRGTKTKTKS LKPSSDNEKP ARKRKEANKA VPDLQAEKRP KKFSHSTRRN RRQVNKVLLE 480 TPEDEIDFQK ISFRDLIIYH EHKEKLEKKE ATTRQPATNQ RTDTVGEEIY NDGEESLADE 540 QGRGTDDDET PDVVDMTSAY FNYHSFMDKT SRTKWSKHDT ERFYEAVRQF GTDFCMIQQL 600 FPGRTRHQIK LKFKNEERHH PFRLSDAITN RAKDHSQFLS LIGQLQEAAN KAKHESNEDE 660 LTENSGDEEL GELAPETNEE EVAKPGEVED TKMEEFVGEI HSPLKADGSD DDDPHRWDEY 720 KFDYW

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDGRG  60
NTKSIKSSSQ LPVIEENKES EDDLLLATVD STQLDLDSCG GILPSGSTID GPVGVENPTD  120
DSKNSGILNY SHSSASRAHE ATVLGQSGLG SIQPEDGHSN DGKIAGQNTD VFDELEWLDD  180
FHNQPKNEAD PSSLKQATIS NEDGDLDTQR LEVEECGAGA NITRDIISSG TTTPSEQPAC  240
KYIPKPKMRV AGDSCTQISQ PEISNTLPPS PQVISCDTRC MHEASIGTHS DGVLNDSSIN  300
FDDYSPVNQH IEAPVNVESL AYDSYGDILV DDFNSDDQDE MLREEGGKNG EEDPLSQSNM  360
SQQQEMFPPV GEEIDHSKTS RKLRQQVSHQ LDDPEDGVDD FPSERFSNYD IHGDGYKKNG  420
RRGTKTKTKS LKPSSDNEKP ARKRKEANKA VPDLQAEKRP KKFSHSTRRN RRQVNKVLLE  480
TPEDEIDFQK ISFRDLIIYH EHKEKLEKKE ATTRQPATNQ RTDTVGEEIY NDGEESLADE  540
QGRGTDDDET PDVVDMTSAY FNYHSFMDKT SRTKWSKHDT ERFYEAVRQF GTDFCMIQQL  600
FPGRTRHQIK LKFKNEERHH PFRLSDAITN RAKDHSQFLS LIGQLQEAAN KAKHESNEDE  660
LTENSGDEEL GELAPETNEE EVAKPGEVED TKMEEFVGEI HSPLKADGSD DDDPHRWDEY  720
KFDYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-36	MYB_related family protein