PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938451.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 253aa MW: 25828.8 Da PI: 9.6789

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938451.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.5	9.7e-38	27	102	2	78
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaess 78 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ + XP_022938451.1 27 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStiS---A 102 78**************************************************************99999777331...2 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MSGSDGVNCN NGAIIDHSQT TNNGGLAVKK PPSKDRHSKV DGRGRRIRMP IICAARVFQL 60 TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPASFSTI SASLRGGSAA ASSLDHKPLL 120 APAPFILGKR VRTDDDGDNK DDGSGGGGGG GGVSVGSTVS SFMGTAAAGG YWAIPTRPDF 180 GQVWSFAAAA AAAPEMVIQP TAVSHPASLF VQQQSMGEAS AAKVGNYLPG HLNLLASLSG 240 GPGSSGRRDN DHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-58	TCP family protein