PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938527.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 227aa    MW: 26518.2 Da    PI: 9.2279
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938527.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.42.2e-33231152103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed++++++isw+++g+++vv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+k+ +++         weF +++F+kg ke l +
  XP_022938527.1  23 FLAKTYLLVEDPTTDDVISWNDDGTALVVWHPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKIATSR---------WEFYNDKFQKGGKERLYE 108
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  XP_022938527.1 109 IRRRKHK 115
                     ****976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGEQPAIGLG DVCQKPKPSP PPFLAKTYLL VEDPTTDDVI SWNDDGTALV VWHPPEFARD  60
LLPTLFKHSN FSSFVRQLNT YGFRKIATSR WEFYNDKFQK GGKERLYEIR RRKHKSNAKA  120
IEATHRDDLD EDEWSWSTSS STDHYATLVD ENKRLKKEKG ALRFEVKNMK RKCRELIDLI  180
GKYELGINGY DKKEDEMMVM KPNLKLFGVK LEVGEEDEMV RQSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.14e-58HSF family protein