PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938545.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 361aa MW: 39446 Da PI: 6.3474

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938545.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.3e-32	201	256	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+ +vkSHLQkYRl+ XP_022938545.1 201 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNGEVKSHLQKYRLH 256 79****************************************************97 PP
2	Myb_DNA-binding	42.4	1.6e-13	203	254	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_022938545.1 203 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNGEVKSHLQKYR 254 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MVYSYKMQEI ASTMGFTLSD FADTLEQERT KVLMFQRELP LCLQIVSHAI DCCRQHLSET 60 TTENRQSECS DQTSSDMGLV LEEFIPINGV FDSEQPRHLH EAQTENNKMN DSDLNNLNLP 120 PSDWLRSAQL WNQTSDPPPL SQDTTVVEVN RNGGAFQPFQ KEKTGGGGGM MSSSSDPVPA 180 VETGLGGSSR REEKEAQNQR KQRRCWSPEL HRRFLHALQQ LGGSHVATPK QIRELMKVDG 240 LTNGEVKSHL QKYRLHTKCP TPTIHNNETV QPPQFLVVGG IWVPASDYAT TSSREAVSAA 300 TANGIYAPVV AAAAPQPLPS TVQKPNPRPM IPSSSAAATA AAECNSSTTS SSTRTSVSPA 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MVYSYKMQEI ASTMGFTLSD FADTLEQERT KVLMFQRELP LCLQIVSHAI DCCRQHLSET  60
TTENRQSECS DQTSSDMGLV LEEFIPINGV FDSEQPRHLH EAQTENNKMN DSDLNNLNLP  120
PSDWLRSAQL WNQTSDPPPL SQDTTVVEVN RNGGAFQPFQ KEKTGGGGGM MSSSSDPVPA  180
VETGLGGSSR REEKEAQNQR KQRRCWSPEL HRRFLHALQQ LGGSHVATPK QIRELMKVDG  240
LTNGEVKSHL QKYRLHTKCP TPTIHNNETV QPPQFLVVGG IWVPASDYAT TSSREAVSAA  300
TANGIYAPVV AAAAPQPLPS TVQKPNPRPM IPSSSAAATA AAECNSSTTS SSTRTSVSPA  360
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-86	G2-like family protein