PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938586.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 199aa    MW: 22304.4 Da    PI: 9.1685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938586.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-061051441155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rR +r+ +++  L++l+ +      +K + a++L++A+ YIk  q
  XP_022938586.1 105 RRSQRLSDKITALQKLVSPY-----GKTDTASVLQEACLYIKFVQ 144
                     7889**************99.....9****************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDVPSQVVNY YGFCLESKLF NNDGQLKGEG FTIPCQHPIT YQPGCNASNS MTENVSPQSV  60
LFPKKISFPQ NESHAKKREF FAQKGVQAAP YDLAGDNKRM KEPVRRSQRL SDKITALQKL  120
VSPYGKTDTA SVLQEACLYI KFVQEHIQNL LQMQSSAYKN LNPQGTQQRQ GNLRSEGLCV  180
VPVTFTQKIA LDKDINLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.15e-21bHLH family protein