PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938604.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 542aa MW: 61560.5 Da PI: 7.089

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938604.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.7	9e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g++++l evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_022938604.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIKL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +t+Wvmheyrl XP_022938604.1 100 S-ESRAVGMKKTLVYYRGRAPHGARTNWVMHEYRL 133 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIKLEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS ESRAVGMKKT LVYYRGRAPH 120 GARTNWVMHE YRLGDREIEV ACSGLQDAYA LCRVFKKNTI IAPKIEHHHQ YCNITSSSNQ 180 FINSARSSKL YSEGRCEQPE SSWSQFLSQE AFNSATLFPS YANIPYPPSK VDSALECARL 240 QHRFTLPPLE VEDFPHPGYS DHFKTPIPTN PTMLDGGSSE ASANQSWDGG IGNAYACSKE 300 DFTFMDTKDG FEDWNSIARF DMESFWEDPY SKCIDVGNVG DDVPVENLRW VGISNKDLDK 360 NCMEDSKLIP IHNISNFQIE DHQNHLQDQP MNLDNYVVEG SSTSANHLRS QSFEVVEEMK 420 VNHGLLMSTR QAAETLFHQT MPSETVKVQS LRCLVAPNLS SRHERTAQKT GSSLLLSGSC 480 LKKTWSKFQR KMGSVLEVVL NEDEEHRSKK GEALNMILKN TRIFFSIASL AVCSICLAKL 540 YL

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIKLEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS ESRAVGMKKT LVYYRGRAPH  120
GARTNWVMHE YRLGDREIEV ACSGLQDAYA LCRVFKKNTI IAPKIEHHHQ YCNITSSSNQ  180
FINSARSSKL YSEGRCEQPE SSWSQFLSQE AFNSATLFPS YANIPYPPSK VDSALECARL  240
QHRFTLPPLE VEDFPHPGYS DHFKTPIPTN PTMLDGGSSE ASANQSWDGG IGNAYACSKE  300
DFTFMDTKDG FEDWNSIARF DMESFWEDPY SKCIDVGNVG DDVPVENLRW VGISNKDLDK  360
NCMEDSKLIP IHNISNFQIE DHQNHLQDQP MNLDNYVVEG SSTSANHLRS QSFEVVEEMK  420
VNHGLLMSTR QAAETLFHQT MPSETVKVQS LRCLVAPNLS SRHERTAQKT GSSLLLSGSC  480
LKKTWSKFQR KMGSVLEVVL NEDEEHRSKK GEALNMILKN TRIFFSIASL AVCSICLAKL  540
YL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-137	NAC family protein