PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938616.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 277aa    MW: 31769.1 Da    PI: 4.3669
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938616.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.3e-2064117356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t+eq++ Le  Fe ++++  e+++eLAkklgL+ rqV vWFqNrRa++k
  XP_022938616.1  64 KKRRLTQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWK 117
                     5678*************************************************9 PP
2HD-ZIP_I/II130.66.2e-4263155193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrl++eqv+lLE sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+  ++ + + ke+e+L++e+++
  XP_022938616.1  63 EKKRRLTQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFCSSYDFMAKENERLKAEVAS 155
                     69**********************************************************************************999999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MMSDGLIFNR SPGHANMLFF GSGDSILRGS CFTKGMEENS KRPFFSSPDD LFDDDYYDDQ  60
PPEKKRRLTQ EQVHLLEISF EAENKLEPER KTELAKKLGL QPRQVAVWFQ NRRARWKTKQ  120
LERDYDLLKS SYDSFCSSYD FMAKENERLK AEVASLTEKL QAKEVVESSF QAKKSEPILE  180
DQLLVSVVQH NMKIDDHHSC RSNGSAVLDE DGPQLLDSGD SYLLSNDYDG CVLPVFGVNS  240
EEEDVSDDGQ GYFSDVYTAA DQQTHEAEPL TWWDWSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112120RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-69HD-ZIP family protein