PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939069.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 182aa    MW: 20273.8 Da    PI: 7.5409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939069.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-10117160755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_022939069.1 117 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 160
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MAVANSAEQE QQISESLINF KCGIGNNEAL LSFEPQGVCQ LDTHNWDHQR AMEDRSPPKH  60
HGDHGPLYGC LSDAIQDPEA AQDITGNHKR SHTTGNRSGG VCKKQCKSST AKDPQSIAAK  120
NRRERISERL KILQELVPNG SKVDLVTMLE KAISYVKFLQ LQVKILATDE FWPVQGSRYF  180
TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-42bHLH family protein