PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939188.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 254aa    MW: 28829.5 Da    PI: 6.995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939188.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.7e-09139186455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++YI+sLq
  XP_022939188.1 139 SHSLAERVRREKINQRLRFLQDLVPGC----YKTMGMAVMLDVIINYIQSLQ 186
                     8*************************9....356999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MKGHQWRLLP LQKQTLYKAC FGRAMGYNDL EMISNHFTVE SSNESDHYQG TIMSSANPFF  60
TDTFCFEKFD HFNEIPSCVA PAAALCSSVP PNYSSFPALH TDGSKSTGGR KRKRENERDE  120
EKPKGVIHVR AKRGQATDSH SLAERVRREK INQRLRFLQD LVPGCYKTMG MAVMLDVIIN  180
YIQSLQNQIE FLSMKLSVAS RYYDFNNSSE TDEIEIMQAT NGCGYMEEMG GRVVVREEEG  240
NGGSFYHHST LPPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.24e-48bHLH family protein