PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939212.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 269aa    MW: 30378.4 Da    PI: 6.4023
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939212.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.94.4e-1975176196
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TT..HHHHHHHHT--TT-EEEEEE-SS. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkG..WkeFvkangLkegDfvvFkldgr. 87 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl++   + +Fv+a+gL+ gDf++ +  ++ 
  XP_022939212.1  75 FEKELKNSDVSSLRRMILPKKAAETHlpALDSKEGIIITMDDLDGlHVWSFKYRFwpNNNSRMYVLENTviTGDFVNAHGLQLGDFIMVY--QDy 167
                     99**************************7778899**********9*******9989999999***96533799**************99..666 PP

                     SEE..EEEE CS
              B3  88 sefelvvkv 96 
                     ++ ++v+++
  XP_022939212.1 168 ENLNYVIQA 176
                     777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MPFLDYQPPP PPPPPPPPRD LAAAVQAASL HRKKRMSRHR RRSSSNLHFS FPSSSAALLP  60
PPPRVIDPRR LKFLFEKELK NSDVSSLRRM ILPKKAAETH LPALDSKEGI IITMDDLDGL  120
HVWSFKYRFW PNNNSRMYVL ENTVITGDFV NAHGLQLGDF IMVYQDYENL NYVIQAKKAS  180
DQEMYTGIGT NVVINGDIVF HDYDPNKVGN SIYVPSPTMD VSSFIYDTSS AFDNDSTFDF  240
MSGSVTNYSR MGGLEGFGSV ENLSLDEFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-81B3 family protein