PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022939364.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 231aa MW: 26312.5 Da PI: 7.3224

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022939364.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	8.8e-08	15	58	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT Ed+l+ +a + + +W ++a +++ g+++ ++k+++ XP_022939364.1 15 QWTRLEDKLFEEALVVVPENlpdRWQRVADHVP-GKSPWEVKDHY 58 6***************99*********.********9 PP
2	Myb_DNA-binding	44.4	3.8e-14	114	158	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_022939364.1 114 PWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKY 158 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVVMSHDSRW TNMTQWTRLE DKLFEEALVV VPENLPDRWQ RVADHVPGKS PWEVKDHYEA 60 LVHDVLEIDS GRVELPSYAD ETAGGLLEWD SSGQISFGTR AKASGDNERK KGTPWTEEEH 120 RLFLLGLKKF GKGDWRSISR NVVITRTPTQ VASHAQKYFL RQNSGKKERK RSSIHDITTV 180 DNNSIPMPID PKWISPAPNP TVQSSMQQVS PTGHLQDQGG SFGFQNYRFP M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	6e-71	MYB family protein