PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022939378.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 286aa MW: 32548 Da PI: 8.6781

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022939378.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.6	3.5e-55	17	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i e+d++k+ePwdLp ++k +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdke+l+ XP_022939378.1 17 LPPGFRFHPTDEELITHYLSPKVLNTNFTA-VAIGEADLNKSEPWDLPGRAKMGEKEWYFFCVKDRKYPTGLRTNRATDSGYWKATGKDKEILR- 109 79***********************999.67***********99999************************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg+kktLvfy+grapkg+k++Wvmheyrl XP_022939378.1 110 AKRIVGMKKTLVFYTGRAPKGHKSNWVMHEYRL 142 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MCVCVHMNSI MDEQIELPPG FRFHPTDEEL ITHYLSPKVL NTNFTAVAIG EADLNKSEPW 60 DLPGRAKMGE KEWYFFCVKD RKYPTGLRTN RATDSGYWKA TGKDKEILRA KRIVGMKKTL 120 VFYTGRAPKG HKSNWVMHEY RLAPKSPLSK NEWVICRIFN KRSGEKPPQS STALPPLMEY 180 SHSETPYSAV ERPPRVTCFS NTSDRAYNFN PSPPAFHFPN PSPPSVWMPG NSVVRMLVEN 240 QRASELMNPK VEITGFGRGI GTMEEDHHNP SSPSGDPIDL ESLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	2e-92	NAC family protein