PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939469.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 278aa    MW: 30936.4 Da    PI: 10.5604
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939469.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind305.71.6e-9312781301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     md d+ + rn+gyyep+  lk  lglql+s+iaer  k     r+  + + + ++a+++r+          ++  rd ++++       + +k++
  XP_022939469.1   1 MDGDALNMRNWGYYEPS--LKPPLGLQLISTIAERGVKHflpgRDPSA-IVNINGAFHSREsvvseasvpTNW-ARDGWMNH-------QSDKFF 84 
                     99999988*******99..*******************9999766666.99**********999888887777.88999988.......99**** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ ++s        ++ l +t+  + l       l+++ +   + e   +l iee ++++k +k++kkrq++  pk+++ kk++k  +    k
  XP_022939469.1  85 NMLPPNTS--------YSLLAQTSAPQPLPI-----LQPHDTS--RDE--MVLRIEE-PSVKKGAKQSKKRQNGGAPKTPNPKKPRK--P----K 155
                     ****8886........667777777776665.....4444333..223..3344444.6777888999999************9999..2....2 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++ +s+ +++ka+kk++dlv+ng ++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCtt++Sv+PLP+s krrgaRiagrKmSqgafkk+LekL
  XP_022939469.1 156 NNDPSV-QQVKAPKKKLDLVINGFNMDISSIPIPVCSCTGTPHQCYRWGYGGWQSACCTTSLSVHPLPMSEKRRGARIAGRKMSQGAFKKVLEKL 249
                     333443.579************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy++snp+DL++hWA+HGtnkfvtir
  XP_022939469.1 250 AAEGYNFSNPIDLRSHWARHGTNKFVTIR 278
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDGDALNMRN WGYYEPSLKP PLGLQLISTI AERGVKHFLP GRDPSAIVNI NGAFHSRESV  60
VSEASVPTNW ARDGWMNHQS DKFFNMLPPN TSYSLLAQTS APQPLPILQP HDTSRDEMVL  120
RIEEPSVKKG AKQSKKRQNG GAPKTPNPKK PRKPKNNDPS VQQVKAPKKK LDLVINGFNM  180
DISSIPIPVC SCTGTPHQCY RWGYGGWQSA CCTTSLSVHP LPMSEKRRGA RIAGRKMSQG  240
AFKKVLEKLA AEGYNFSNPI DLRSHWARHG TNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.15e-96BBR-BPC family protein