PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939499.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 265aa    MW: 28980.9 Da    PI: 4.7338
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939499.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.12.4e-18201234134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022939499.1 201 CLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGR 234
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MEGSLGDEID CGNCFDHIDD LLDFSTEDLD DVPMTTTAAA VFPPIWYTSA VDTGCSDSIV  60
SIGFPNEIYE DIIPSEWFSN LDDSFAGAGT QTVSSSSSES NKFRVSSPVS VLDNSSESSS  120
SKRKELADDA CRRDDASSKR PRQSFFIPPP PHLVSPTSSS DSENSENSEN YGESCSPPPA  180
EKKIKLSSND AFNPRSDSRK CLHCEVTKTP QWRAGPLGPK TLCNACGVRY KSGRLYPEYR  240
PAASPSFVSR LHSNSHKKVI EMRIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-37GATA family protein