PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939503.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 256aa    MW: 27855 Da    PI: 9.1064
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939503.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.001187109123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+++F++   L  H ++H
  XP_022939503.1  87 YECKTCSRTFPSFRALGGHRSSH 109
                     99**********99999999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MNPNGFSEPN SELLGRCNLS SSSSSIGGGG GGGGGSGGED EQEDVAKCLI LLSQGLPASQ  60
PSSSMVKFIE APQGQNGAGK AAECYAYECK TCSRTFPSFR ALGGHRSSHK NPAMAAGDQK  120
SISGTSPAYK HQQQRLNNTI SSPFDPLRMN RTGYYHKTHE FSVCGSGFTS VQALSGHMRR  180
HRRGCGRDSG EIAHRRPQRH RSNLLCLELD LNLPAAEEDK RDRSGVVSMA AMDRVSSHYR  240
EHRAFLIEKF RLNYNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-21C2H2 family protein