PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939510.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 142aa    MW: 15624.4 Da    PI: 7.4333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939510.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-161262155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+ 
  XP_022939510.1 12 KKYKGVRRRK-WGKWVSEIRVP---G-SqERLWLGSYSSPEAAAVAHDVAYYCLRR 62
                    59*****998.**********8...4.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MASNSTSSCD TKKYKGVRRR KWGKWVSEIR VPGSQERLWL GSYSSPEAAA VAHDVAYYCL  60
RRPSNLDHLN FPPTVLPLTN HLLIRDDMSP GSIQKAASDA AMAVDAQYIC NNLPDRGSSG  120
GAGTFQNYTA PNDQDLSVED YL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11521KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-36ERF family protein