PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022939683.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 240aa    MW: 26760.6 Da    PI: 9.7436
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022939683.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-1361107354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  A++ +k+L
  XP_022939683.1  61 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 107
                     79*************************8.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEDNWDKPEG LDSSPEPSLR LPWMINPQLS SSTELRIDGF PSFLTPVEGI IGEDKAASAS  60
KSHSQAEKRR RDRINAQLAT LRKLIPKSDK MDKAALLGSA IDQVKDLKRK AMEASKNMTV  120
PTDMDEVTID STMVEDHSRN NIEIKVSVSC DDRPELFTEL IQVIKGLRLT TIRADMASVG  180
GRIKSILVLG NKDGEKSVCL NTVQQSLKLV LSRLSSSSSA STYRIRSKRQ RFFLPSHYSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-40bHLH family protein