PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022939921.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 218aa MW: 24725.6 Da PI: 9.1299

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022939921.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.7	6.5e-21	40	101	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+ps +++++++++l +++ ++V++WFqN++a+e++ XP_022939921.1 40 KCGRWNPTAEQVKVLTELFRSgLRTPSSDQIQKISHQLsfygKIESKNVFYWFQNHKARERQ 101 568***************99************************************97 PP
2	Wus_type_Homeobox	113.8	8.6e-37	40	103	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_022939921.1 40 KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKR 103 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSRKSINMED GVCSRIYVKG GGCSGEGGGG GGGKGSGSSK CGRWNPTAEQ VKVLTELFRS 60 GLRTPSSDQI QKISHQLSFY GKIESKNVFY WFQNHKARER QKRRKVSLSL DHSHQQQHFL 120 HPLHLSNDHN NNNNNIIPPS NHFADQSSTN KGIMELEPER MMKTLQLFPL NSIDETQGSD 180 DYHQFRVDGK QFEDATSFTY KIETKMDHPP LDLRLSFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	7e-46	WOX family protein