PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940001.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 204aa    MW: 22552.6 Da    PI: 4.6767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940001.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  XP_022940001.1 21 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDKPEQAARAFDAAQFCLRG 70
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MADRRNSGSE TNEESGGQIL KYKGVRKRKW GKWVSEIRLP NSRDRIWLGS YDKPEQAARA  60
FDAAQFCLRG PHAKFNFSDS PPEIDGGDRL SAQEIQAAAA KFAVEHGGEE RVKTGSSSSN  120
EEALTGKHSS GAVDSGDGSS SAWAAWDLLD GGLDFGFGNI MCRNEMVYDG DIIFPGQENM  180
EDRFVDGGEY FCHEANFLWN FDNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-38ERF family protein