PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940006.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 287aa    MW: 31768.7 Da    PI: 8.1498
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940006.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.49.1e-201459147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEdell ++v+ +G ++W++I++ ++ gR++k+c++rw + 
   XP_022940006.1 14 KGPWSPEEDELLRRLVHTYGARNWSLISKSIP-GRSGKSCRLRWCNQ 59
                     79******************************.***********985 PP
2Myb_DNA-binding48.61.8e-1568110347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+ Ed+ +++a+ ++G++ W++Iar ++ gRt++ +k++w++ 
   XP_022940006.1  68 PFTPYEDDTIIQAHSRFGNK-WAAIARLLN-GRTDNAIKNHWNST 110
                      79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MATAGGTKAV DRIKGPWSPE EDELLRRLVH TYGARNWSLI SKSIPGRSGK SCRLRWCNQL  60
SPEVEHHPFT PYEDDTIIQA HSRFGNKWAA IARLLNGRTD NAIKNHWNST LKRKCSSSIA  120
DDFKHHPPKR SASVGAAPTT VASPFYFNHS SPSDSDLSDS SLPGMSSSQV CKSFSPDALI  180
SQSDQPPMET STDPLTSLTL CPPGSDSSEV PKLASEPDQA PQQPVQSSDK LRIESKFFSS  240
EFLAVMQEMI RKEVHDYMSG MEQKGLCLQT EAIRNAVVKR IVINKRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.14e-72MYB family protein