PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940029.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 233aa    MW: 25437.3 Da    PI: 7.7836
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940029.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702211.81.7e-65251663154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                      g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqq ++++ +   + ++ ++kr+re+         + +++ a  +
  XP_022940029.1  25 GGGINCQDCGNQAKKDCTHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQQQRQQQQFR-PDQFDQTTPKRHRET---------QPSIPPAAVT 109
                     5789**********************************************9998886554.455677778888875.........3445555556 PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     + le +++P+e +s+avfrcv+vs++d+ ee+laYqtav+igGh+fkGiLyd+G+e+
  XP_022940029.1 110 SGLELAHFPAEFNSPAVFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDHGPES 166
                     6789999************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNLMINASDH EFTMMRQGAA TGGGGGGINC QDCGNQAKKD CTHLRCRTCC KSRGFHCQTH  60
VKSTWVPAAK RRERQQQRQQ QQFRPDQFDQ TTPKRHRETQ PSIPPAAVTS GLELAHFPAE  120
FNSPAVFRCV KVSAIDNVEE QLAYQTAVNI GGHMFKGILY DHGPESSQNL STGGESSYSH  180
GGDDDGQGLD LVIGASNSFG RVNPSASFVE SSLYPIPINT FTPGMQNFPS SRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.14e-56SRS family protein