PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940075.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 530aa MW: 58324.4 Da PI: 6.4469

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940075.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.6	1.7e-16	340	386	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRR+riN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022940075.1 340 VHNLSERRRRERINEKMKALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 386 5***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MNSCFPDWNF EGDLPPTIHK KSIGHEHEEL VELLWRNGQV VLQSQKGRKS NLISNESGQF 60 QKLNQPVCRS SCGNSSSLIQ EDETVSWIQD PVDDSFEKEF CSNFFSELPL VNPIEIVEQP 120 TKHDGKHPRF GVFDTTSKHP TGLAEFLTNS MPPPRFQCPD STRSNKDLGD LGEMVNSSRV 180 CVPLKGDLGS SNGGRECGNL IQVEGRDCSA MTVGSSHCGS NQVPNPNDLD VSRVSTSGFG 240 NAGLSAGLSK EDNRKMVPQS ERDKTETMDP TTTSSSGGSG SSMDRNRTIG QSTGGNSNKR 300 KGRDREESEC QSETAELESA EGNRTAPRSG SSRRTRVAEV HNLSERRRRE RINEKMKALQ 360 ELIPHCNKTD KASMLDEAIE YLKSLQLQLQ VMWMGSGMAP MMFPSVQHYM SRMAMGIGLA 420 QPSMPSIHNS MQLPRVPIVD QSVSVAPMPN QPMICQPQIF NPMNYQNQMQ NPALQEQYAR 480 LMGFHHMQPA SQPINVFRFC PPSVLQSQTV AAPGPAGGPI TNDTVNGNLG

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MNSCFPDWNF EGDLPPTIHK KSIGHEHEEL VELLWRNGQV VLQSQKGRKS NLISNESGQF  60
QKLNQPVCRS SCGNSSSLIQ EDETVSWIQD PVDDSFEKEF CSNFFSELPL VNPIEIVEQP  120
TKHDGKHPRF GVFDTTSKHP TGLAEFLTNS MPPPRFQCPD STRSNKDLGD LGEMVNSSRV  180
CVPLKGDLGS SNGGRECGNL IQVEGRDCSA MTVGSSHCGS NQVPNPNDLD VSRVSTSGFG  240
NAGLSAGLSK EDNRKMVPQS ERDKTETMDP TTTSSSGGSG SSMDRNRTIG QSTGGNSNKR  300
KGRDREESEC QSETAELESA EGNRTAPRSG SSRRTRVAEV HNLSERRRRE RINEKMKALQ  360
ELIPHCNKTD KASMLDEAIE YLKSLQLQLQ VMWMGSGMAP MMFPSVQHYM SRMAMGIGLA  420
QPSMPSIHNS MQLPRVPIVD QSVSVAPMPN QPMICQPQIF NPMNYQNQMQ NPALQEQYAR  480
LMGFHHMQPA SQPINVFRFC PPSVLQSQTV AAPGPAGGPI TNDTVNGNLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	345	350	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	6e-65	bHLH family protein