PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940110.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 610aa    MW: 68223.3 Da    PI: 7.1709
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940110.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.28.8e-29198251155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_022940110.1 198 KPRVVWSVELHRKFVNAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 251
                     79*******************.********************************8 PP
2Myb_DNA-binding39.91e-12200250148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v+av+qlG +   +k+I   m+ +++t++++ s++qky+
   XP_022940110.1 200 RVVWSVELHRKFVNAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 250
                      678********************************99*************7 PP
3Response_reg75.61.8e-25201281109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ + +l+++l++ +y +v+++ ++  al+ll++++  +D+++ D+ mp+mdG++ll+     e++lp+i+++a+g+++++ + +  G
  XP_022940110.1  20 VLAVDDDPTCLLILETLLRRCHY-HVTTTNQAIMALKLLRDNKnkFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGITHG 112
                     799********************.***************777777*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022940110.1 113 ACDYLLKPVRIEELKN 128
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
MTVEPRVDDP NDQFPVGMRV LAVDDDPTCL LILETLLRRC HYHVTTTNQA IMALKLLRDN  60
KNKFDVVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKFD PKDQMKSINQ AKLDSENGEE VADPNGKFKK KRKDQNYDED  180
DDQDYNGQED DDSSTQKKPR VVWSVELHRK FVNAVNQLGI DKAVPKKILD LMNVEKLTRE  240
NVASHLQKYR LYLRRISCVA NQQANMVTAL SSADPSYMRL GSLNGIGNFH SVTGPPPFPN  300
TAYRSIPTTG MLGRLNTPAC MGMNGLSSPG TVPLESTFQP RPRSANMFRG MLESSGLDRV  360
QHVKHGTVDD LARAFDQRTV FSAAGHLSND PLISVVSASL ESSRPSVDSI RCTGNDWSKA  420
ARSSRMLLHI GNCVSDIASK STQSHDSRTD TQRQAATSSN RYDRVITKVP VQDWNDLEDA  480
YYDTTVACSS SNSFIPVNRA AGTLPKRFEN QNTIFSRSKD FNVISRANDL DRAMVDHDQF  540
KKSSIETSIM LKQGVLYDHQ QKMQARFCSS NCGSLEDIAC AMMKQVQDDA KLLEGDFGCD  600
NFPIGTCTCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135173RRKKFDPKDQMKSINQAKLDSENGEEVADPNGKFKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-133ARR-B family protein