PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022940461.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 326aa    MW: 36279 Da    PI: 4.5161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022940461.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-11162205654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL   ++Y+k+L
  XP_022940461.1 162 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADSIDYVKEL 205
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MELNEHCLLD ELEALRREIN WELAMPTEIN DLISTANAWN FDCSDSSSLP FSLPIDHQDF  60
GYLLAGEDDY SFSGGQFTAA PSTGDSMSYT TFETTPGGFG RCPVMEEEDE IPNLEVLGSC  120
KMEPAYSPEI APVFNAGGTC DFGQKIVGSA SKKLQGKPSK NLMAERRRRK RLNDRLSMLR  180
SIVPKISKMD RTAILADSID YVKELLEKIN HLQREIEMAN PSKLESTGIL RAENPSEYLV  240
RNAPKFNVER REGDTRIEIC CAAKPGLLLS TVHTLEALGL DIQQCVISCF NDFAIQASCS  300
EGTERRPVEE VKQELFENAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165172ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-75bHLH family protein