PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940467.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 148aa MW: 17106.8 Da PI: 10.2746

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940467.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.8	2.6e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCda+v viifsst klyeyss XP_022940467.1 10 RIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSS 59 8***********************************************96 PP
2	K-box	69.3	1.2e-23	78	141	6	69
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++++ +++q+e+a L++++++Lq+++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK XP_022940467.1 78 QLGVSTSEVKYWQREAAMLRQQLQSLQENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKK 141 33389999*******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELAILCD ADVGVIIFSS TSKLYEYSST 60 SMKTLIERYH KTKEEHHQLG VSTSEVKYWQ REAAMLRQQL QSLQENHRQM MGEELTGLSV 120 KDLQNLENQL EISLRGVRMK KVSNCIIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-75	MIKC_MADS family protein