PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022940990.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 271aa MW: 30574.8 Da PI: 5.5524

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022940990.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.9	5.6e-21	100	160	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e++ +l +++e++V++WFqNrRa+ k+ XP_022940990.1 100 RQRWTPTPVQLQILEQIFDEgNGTPSKQKIKEITLHLtqhgQISEANVYNWFQNRRARSKR 160 89***************99************************************97 PP
2	Wus_type_Homeobox	101.9	4.4e-33	99	162	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it +L+++G+i+++NV++WFQNr+aR+++kq XP_022940990.1 99 ARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKEITLHLTQHGQISEANVYNWFQNRRARSKRKQ 162 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MEWANQQQQN NQSEQQLQVQ MQVEQLSNGD GVGGLYVKVM TDEQMELLRH QISVYASICE 60 QLVEMHKAIT AHQDLAGIRV GNLYCDQIMA SAAGHKISAR QRWTPTPVQL QILEQIFDEG 120 NGTPSKQKIK EITLHLTQHG QISEANVYNW FQNRRARSKR KQANSTPNNP DSEPDTEVDS 180 PKDKKTKPEE TFQTYDQFVS NSNNVYSQTS DLGAEMLAFD AQSNKGDPMF QSFGSSHLSQ 240 VATAQNHRNN DKMNVPDGYT PYHPCEGYPL G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	9e-68	WOX family protein