PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941049.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 225aa MW: 24637.4 Da PI: 9.5404

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941049.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.8e-18	39	84	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022941049.1 39 KGPWSAEEDRVLTRLVERYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 84 79***************************9.*********985 PP
2	Myb_DNA-binding	53.4	5.9e-17	93	135	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a+ ++G++ W+tIar ++ gRt++ +k++w++ XP_022941049.1 93 PFSPAEDDAIIAAHSRYGNR-WATIARLLP-GRTDNAVKNHWNST 135 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MSIHHSSSSP STSESSSDDS SLSGKLQPSR NSGDADKIKG PWSAEEDRVL TRLVERYGPR 60 NWSLISRYVK GRSGKSCRLR WCNQLCPGVE HRPFSPAEDD AIIAAHSRYG NRWATIARLL 120 PGRTDNAVKN HWNSTLKRRV RDQRKSAVDH SSDVVVGGSL VAVDDDPLTA LTLATPGIVA 180 GGDAAAASNR RSESLPSGFW EAMRDVVARE VREYMTTTFS EKSGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	5e-57	MYB family protein