PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941124.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 287aa MW: 32679.2 Da PI: 4.4424

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941124.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.9	1.2e-08	26	100	2	77
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 Wt l+L+++ +e + ++ + ++W+ v++++ + + r+++qC+ kw+ l ++ ik++e + +++ s XP_022941124.1 26 WTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAENCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEM-PDDDS 100 ********************************************************99999999999875.44444 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MKEEDGKRGT EVSGSRRTRS RIAPDWTAAD CLVLVNVIAA VEADCWKALS SFQKWKIVAE 60 NCTSLDVARN SNQCRRKWDC LLIEHDVIKQ WELEMPDDDS YWCLESGRRK ELGLPDNFDE 120 EVFKAIDNVV SMRANQSDTE PDSDPEAAVE KVDEAAEPGP KRQRRCSMST RNQSLEKSVK 180 CEEEDEEPQV SSPEVERRGC YIKSHGEKAT DSTEPEEQTM AKKLLETAEK VQAIVSENAE 240 YATSDEKNDN YNVRTNSIRH QGSKLIKCLE DFLNTINDLH SLLEDQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	8e-57	Trihelix family protein