PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941281.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 428aa MW: 46622.4 Da PI: 6.7105

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941281.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.2	2.1e-36	43	156	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai++l +++ +++ +++s++s++++++++ XP_022941281.1 43 GRKDRHSKVCTARGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPAIDKLRELPGWNPNGLNTSSEKSATQKDEKNsenkipvav 137 89*************************************************************55555444333444444433333223344555 PP TCP 89 ..................k 89 + XP_022941281.1 138 hppegsttrnfvagnggvS 156 5555555555555544442 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MGEFGHQQPT KSSRLGMRST GGGSGGGGEI LEVQGGHIVR SIGRKDRHSK VCTARGPRDR 60 RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NGLNTSSEKS 120 ATQKDEKNSE NKIPVAVHPP EGSTTRNFVA GNGGVSECTM KNLQNASTED NPNSDNSSFL 180 PPSFDSDSIV NTVKSFLPTT TTAAAETPSS IFEFDAFPPD LLSRTSSRAQ DLRLSLQSFE 240 GSISKLESER TQHSITQNHQ NDHPFFSGST PLAGFDGWSE QHPQSAMEIG RLQRILHWNT 300 VNADLSGVDG GVNGEFLYNS QPTTSSFQPP PPSPILQPLF GENQLVSQRG PLQSSYTPSI 360 RAWIDPSITF FDNQQHPTPP SIYQSTFPGL GFASGGFPRF LIPARIPGEE EHDGISEKPS 420 SASSNSRH

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MGEFGHQQPT KSSRLGMRST GGGSGGGGEI LEVQGGHIVR SIGRKDRHSK VCTARGPRDR  60
RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NGLNTSSEKS  120
ATQKDEKNSE NKIPVAVHPP EGSTTRNFVA GNGGVSECTM KNLQNASTED NPNSDNSSFL  180
PPSFDSDSIV NTVKSFLPTT TTAAAETPSS IFEFDAFPPD LLSRTSSRAQ DLRLSLQSFE  240
GSISKLESER TQHSITQNHQ NDHPFFSGST PLAGFDGWSE QHPQSAMEIG RLQRILHWNT  300
VNADLSGVDG GVNGEFLYNS QPTTSSFQPP PPSPILQPLF GENQLVSQRG PLQSSYTPSI  360
RAWIDPSITF FDNQQHPTPP SIYQSTFPGL GFASGGFPRF LIPARIPGEE EHDGISEKPS  420
SASSNSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-76	TCP family protein