PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941398.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 256aa MW: 29185.1 Da PI: 9.8313

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941398.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.1	2e-54	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++++l++ +i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nrat sgyWkatg+dk+v+++ XP_022941398.1 17 LPPGFRFHPTDEELVVHYLKKKATSQPLPA-AIIADVDLYKYDPWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIAS 110 79**************************.88***********999999***********************************99 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy+g++pkg k++W+mheyrl XP_022941398.1 111 leGNRKVGVKKALVFYHGKSPKGIKSNWIMHEYRL 145 989999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEKLKSAPEA DSERPNLPPG FRFHPTDEEL VVHYLKKKAT SQPLPAAIIA DVDLYKYDPW 60 ELPAKANYGE QEWYFFSPRD RKYPNGARPN RATVSGYWKA TGTDKPVIAS LEGNRKVGVK 120 KALVFYHGKS PKGIKSNWIM HEYRLVDYKH NRGKKNSLRL DDWVLCRIYK KPNSNKLGID 180 HEQEDSSNYM AEQTPPMTAT MNFSVYPELA SSFLPTKRML XMITVVDGEQ PSSKKLQLME 240 GGSDNSIAAL LSQLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	5e-93	NAC family protein