PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941409.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 574aa    MW: 64423.2 Da    PI: 8.8158
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941409.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.22.3e-1623108899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     s++l s rl lp kf++  g++   ++ +tl  +sg +W v l   ++ +  ++ +GW  F++++ L+ gDf+vF++dg+ +f  +++vf++
  XP_022941409.1  23 SSTLCSERLKLPLKFVRYLGEI--IGRSVTLIGPSGHTWLVDL--IQQNDNLFFCDGWPTFARDHSLECGDFLVFRYDGELNF--TLQVFDQ 108
                     6778899*********666867..6668***************..77777799999*********************996666..8888876 PP
2B344.23.5e-14220312398
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++ +v  s  l +p +f  +h   + ++ +l+l +++g+sW v+     +   +++l +GW  Fv+ n+++ gD++vF+l+ + e   +v++
  XP_022941409.1 220 RIMKSFNVRGSYTLNIPYQFSMAHL--PSCKLKLVLHNLKGESWPVNSVPtIRVHTSHTLCGGWMAFVRGNDINMGDICVFELVLDCEL--RVRI 310
                     55666667777889******98995..458889**************954544445699999********************9875555..9999 PP

                     E- CS
              B3  97 fr 98 
                     fr
  XP_022941409.1 311 FR 312
                     98 PP
3B346.28.1e-15455542696
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++ +++ s  l +p +f + h  +  ++++++l+ ++g  W v+    + ++ ++++ +GW +Fv++ng++ gD+++F+l+g+ e   +v+v
  XP_022941409.1 455 KKFNTSGSYTLKIPHQFSSVHFPN--SKTEIILRGPNGGCWIVNSVPdSMGRMMHTFCGGWMSFVRDNGIQMGDICIFELVGKCEL--LVHV 542
                     455556667799******999633..5679***************6545555559999**********************995444..6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MMETESCQLM VTSRRPCFYA FYSSTLCSER LKLPLKFVRY LGEIIGRSVT LIGPSGHTWL  60
VDLIQQNDNL FFCDGWPTFA RDHSLECGDF LVFRYDGELN FTLQVFDQSA CEKEDAFHSQ  120
CSQDNTGHKR DREEDPTCPD TCAEAVAKKM RSIFYVHSEC REGLAAIKTV EVHKNGAGQN  180
GISKVDDVTM QDKILALSLL SQDEKKISQS FSSNYPYFVR IMKSFNVRGS YTLNIPYQFS  240
MAHLPSCKLK LVLHNLKGES WPVNSVPTIR VHTSHTLCGG WMAFVRGNDI NMGDICVFEL  300
VLDCELRVRI FRVGKEISED QSRKGSLSQL DADHAKISRK TLKGLPKKMN GNSHKVHSKC  360
PKRIEVLDKK SSKSWQEPFC NDVRKHSSAK KVSTKVVVCS QSKKPSKRLV NQRTSVKGDL  420
VLPARLGLRA MLALDEERAA KSFASCFPTF VRIMKKFNTS GSYTLKIPHQ FSSVHFPNSK  480
TEIILRGPNG GCWIVNSVPD SMGRMMHTFC GGWMSFVRDN GIQMGDICIF ELVGKCELLV  540
HVTGVGKKGF DLSSEVATCS ELAIVPTTSN HPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-20B3 family protein