PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941441.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 211aa MW: 24949.6 Da PI: 8.7829

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941441.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.3	4.3e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda v++++f+s+gk++ey+s XP_022941441.1 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCS 59 79***********************************************96 PP
2	K-box	91.7	1.2e-30	71	170	1	100
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l++el+++kke++n+q e+Rhl Ged++sL++keL+ Leq+Le++l +R+k++e+++++ + +++e+e+++ n++L XP_022941441.1 71 YHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKELMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELY 165 8999******************************************************************************************* PP K-box 96 kklee 100 +k +e XP_022941441.1 166 QKEME 170 *9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AHVSLVVFAS SGKMHEYCSP 60 SMQLVDILDK YHKQSGKRLW DAKHENLSNE LDRVKKENDN MQIELRHLRG EDITSLNYKE 120 LMALEQALEN GLIGVREKQS EFMKMMRTNE RMMEEENKRL NNELYQKEME AMGECVREMD 180 NGYNQRMRDF NSQMPFAFRV QPIQPNLQER I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	5e-82	MIKC_MADS family protein