PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941450.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 404aa MW: 43694.6 Da PI: 5.6688

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941450.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	3.9e-10	239	287	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_022941450.1 239 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 287 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS 60 SHRDFSNSFP IVLENHHHGG GSGTSQTVQY PTDLEMGTKL PCFGSGNYSD MFGSFGLADQ 120 ILGGCSSSYR NGGTANTAQT SQETLPPPSG EEAALGSPNG KIRKRALDSA FPFSSNTKSE 180 GKVKKDVSGE SSSTQEEKNP EMEQNLRTGK QAKEKSSNSG EAPKENYIHV RARRGQATNS 240 HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV 300 NPDMNIDLER ILSKDIFQVR GSNESVLGFD HPGMSAAPPV VPAHRMFQFQ GMMSNMASTS 360 TSTQFPSLPQ TMLESDIQTL LQMGFDSGSA IDNLGPNGRL KAER

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS  60
SHRDFSNSFP IVLENHHHGG GSGTSQTVQY PTDLEMGTKL PCFGSGNYSD MFGSFGLADQ  120
ILGGCSSSYR NGGTANTAQT SQETLPPPSG EEAALGSPNG KIRKRALDSA FPFSSNTKSE  180
GKVKKDVSGE SSSTQEEKNP EMEQNLRTGK QAKEKSSNSG EAPKENYIHV RARRGQATNS  240
HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV  300
NPDMNIDLER ILSKDIFQVR GSNESVLGFD HPGMSAAPPV VPAHRMFQFQ GMMSNMASTS  360
TSTQFPSLPQ TMLESDIQTL LQMGFDSGSA IDNLGPNGRL KAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	2e-77	bHLH family protein