PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941478.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 401aa    MW: 43769.2 Da    PI: 7.7431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941478.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-052893271255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022941478.1 289 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 327
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MESTANLHQL QDQLLVPPPP SSSPSSSSPP IVPSCFSLPS THGWTPNISL NNNNNNTCNY  60
NSRVFNGLSS SVPVRSDCGV KNTNSSMLLQ DLGFQWNGAS SSGSFFSHFL HAGGKIKEEM  120
LNSPSTNQDF HPFPSTNHVK NNDSDLNDPS HKLFIKTQIN GGDHTEPGEF FNKIYPSINV  180
SDWNLSSPPP PPFSNSLDLN LQTPPDLFHS QDSFGIFRQT LSDFHDQIHP PAILPCISSK  240
VTTPFSAELT EPKRPCTCIR PMLNQPSPPP PLKKSRLDSR ASCPPFKVRK EKLGDRIAAL  300
QQLVAPFGKT DTASVLMEAI GYIKFLQNQV ETLSVPYMKP SCNKTTRPTY RSPVEGGHEG  360
QLDRDLRSRG LCLVPLGCLS YVAGDGGGIW TPPGFSGGTS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-49bHLH family protein