PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941480.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 338aa    MW: 37034.9 Da    PI: 8.0256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941480.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.3e-052262641255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022941480.1 226 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 264
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAGLPISLFP VRSDCGVKNT NSSMLLQDLG FQWNGASSSG SFFSHFLHAG GKIKEEMLNS  60
PSTNQDFHPF PSTNHVKNND SDLNDPSHKL FIKTQINGGD HTEPGEFFNK IYPSINVSDW  120
NLSSPPPPPF SNSLDLNLQT PPDLFHSQDS FGIFRQTLSD FHDQIHPPAI LPCISSKVTT  180
PFSAELTEPK RPCTCIRPML NQPSPPPPLK KSRLDSRASC PPFKVRKEKL GDRIAALQQL  240
VAPFGKTDTA SVLMEAIGYI KFLQNQVETL SVPYMKPSCN KTTRPTYRSP VEGGHEGQLD  300
RDLRSRGLCL VPLGCLSYVA GDGGGIWTPP GFSGGTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-48bHLH family protein