PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941481.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 336aa    MW: 36804.7 Da    PI: 8.0256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941481.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.3e-052242621255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022941481.1 224 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 262
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAGLPISLLR SDCGVKNTNS SMLLQDLGFQ WNGASSSGSF FSHFLHAGGK IKEEMLNSPS  60
TNQDFHPFPS TNHVKNNDSD LNDPSHKLFI KTQINGGDHT EPGEFFNKIY PSINVSDWNL  120
SSPPPPPFSN SLDLNLQTPP DLFHSQDSFG IFRQTLSDFH DQIHPPAILP CISSKVTTPF  180
SAELTEPKRP CTCIRPMLNQ PSPPPPLKKS RLDSRASCPP FKVRKEKLGD RIAALQQLVA  240
PFGKTDTASV LMEAIGYIKF LQNQVETLSV PYMKPSCNKT TRPTYRSPVE GGHEGQLDRD  300
LRSRGLCLVP LGCLSYVAGD GGGIWTPPGF SGGTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.19e-49bHLH family protein