PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941499.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 192aa    MW: 21250.6 Da    PI: 6.3574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941499.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_022941499.1 34 LYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 83
                    69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSQTEEPPTQ SISPTSSNSS SSSKRVRDSS KHPLYRGVRM RAWGKWVSEI REPRKKSRIW  60
LGTFPTPEMA ARAHDVAALS IKGNNSAILN FPELAHSLPR PASFAPRDIQ AAAAKAAHMD  120
PSQYSASSAA PDDSDDLAEI IKLPNLGTNY DHSIGNNEFV LMDSSESCWA YPPPWVRTME  180
DTTEDGNFLR DY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-61ERF family protein