PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941616.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 427aa    MW: 46200 Da    PI: 6.9202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941616.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86e-063163541154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022941616.1 316 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 354
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MAEEFQSSGN WWDATRSRYE AGISPSSSAI TTFVDHPDSG AGAGDPNLHI MGLGLDWNQP  60
LFRGGGEKAA ESSFRSMLQP DNMNLNMQET GQHHQHQQQQ IQWMRSEKLY SGESPATEFK  120
PINRGFSLDH HNQPPPQFSP SHYSTGDSTI TSFPLDTAAA AAALYGNSTT LLQGLLAGGG  180
SEQQQVSGAG MNFPYNTHFG MNSSELMAAA SWSNSKVPPF LRNSPPKGAA PTPPQSQLQF  240
SNNTAFWNAS DMKDARASYI PASYNAAALA GDKSKSRSEG GKKSGNDQNQ QQTGGGGGAV  300
KRPRNETAPG LPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVLS  360
TPYLKSGGGA VVQQQQQKWC EKRTEGEGKE EDLRSRGLCL VPVSSTFPVT HETTVDFWTP  420
SFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-58bHLH family protein