PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941644.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 255aa    MW: 28661.7 Da    PI: 6.3077
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941644.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY681.4e-21118178258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.EEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.vveitYegeHnh 58 
                     +Dg +WrKYGqK ++++++p+sYYrCt++   +Cp+ k+v+r ++  k + eitY ++H++
  XP_022941644.1 118 EDGRAWRKYGQKAIQNKTYPKSYYRCTHKydqSCPAVKHVQRIEDSSKiMYEITYISDHTC 178
                     79**************************99999*********9977762569*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEATGYRHHR LTAEAWRRII EILRRGRQSA AQLQIDLQSA AAATGLNRLA LADEVESSFA  60
EVISLVVSSE SASCPDHSLC SDLDSGYSRR SPAVKDLGRG NKRRKLANTR TVTAATAEDG  120
RAWRKYGQKA IQNKTYPKSY YRCTHKYDQS CPAVKHVQRI EDSSKIMYEI TYISDHTCVP  180
ASPTADTSSN SYNLICFSDS HNGQFTEGTD DDATKVGETT MNEIHLWPEF NDFETQYGLF  240
GDNEDPYFFV DSFLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102129KRRKLANTRTVTAATAEDGRAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-27WRKY family protein