PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941701.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 212aa    MW: 23564.6 Da    PI: 4.2966
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941701.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.47.4e-36151151100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+ap f  ++ +++fa+vhk+FGasnv+kll +lp + r++a+ +++yeA  r+rdP yG+v++i++lqq++++l++e+
  XP_022941701.1  15 SCGACKFLRRKCSNHCVFAPFFTYDEaTSHFAAVHKVFGASNVSKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEI 109
                     6*********************998868******************************************************************* PP

          DUF260  95 allkee 100
                     ++l+++
  XP_022941701.1 110 DMLGSQ 115
                     999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTGLTSYSSS SSSSSCGACK FLRRKCSNHC VFAPFFTYDE ATSHFAAVHK VFGASNVSKL  60
LLHLPMHIRS HAAITVAYEA LERMRDPTYG CVAHIFALQQ EIMSLQEEID MLGSQIANFT  120
ADMDNVAVVE NPCIELQVSK QLNDLVMNTN DYQNELLSQL PNFDQVEIND AQMISPLFCI  180
GEEDGFFGCN PNNAMENSAF DVAVDETFGY LW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.12e-58LBD family protein