PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941752.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 325aa MW: 36849.6 Da PI: 4.5632

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941752.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.3	1.3e-18	56	109	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_022941752.1 56 KKRRLSVEQVKALEKNFEVENKLEPERKVKLARELGLQSRQVAVWFQNRRARWK 109 56689************************************************9 PP
2	HD-ZIP_I/II	121.7	3.6e-39	55	147	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls eqvk+LE++Fe e+kLeperKv+lareLglq rqvavWFqnrRAR+ktkqlE+dy +Lk++y++lk e+L++++++L +e++e XP_022941752.1 55 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLARELGLQSRQVAVWFQNRRARWKTKQLERDYGVLKTNYQNLKLTYETLQHDNQALLKEIQE 147 69*************************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MKRPADSMGA LMSISPTADQ EQSPRNNGVN GTEFQSMLDG FGEDGYVEEL GHVSEKKRRL 60 SVEQVKALEK NFEVENKLEP ERKVKLAREL GLQSRQVAVW FQNRRARWKT KQLERDYGVL 120 KTNYQNLKLT YETLQHDNQA LLKEIQELKK KLQEDNSESN LSVEEETSVP ADSENALIEQ 180 IKPEITDQFS VPLATESQDF NYASLHNNGG EGEEVSLFPD FKDGSSDSDS SAILNEDYGP 240 TVAISSPVVL QHNHQHFMTG AASPSPSPDV KLNCATTALN YLQYQKGYQQ QSQMFPKMEE 300 HNFFSGEETC NFFSDEQAPT LHWWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	85	KKRRLSVEQVKALEKNFEVENKLEPERKVK
2	104	112	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	2e-56	HD-ZIP family protein