PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941768.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 341aa    MW: 38562.2 Da    PI: 8.1164
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941768.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.71.5e-3040144199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++ ++  l +ed+ g+sW+++++y+ +s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022941768.1  40 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGlGHlGK 134
                     89***************************9555568889************************************************66577788 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      ++++ ++r+
  XP_022941768.1 135 DRFFIDWRRR 144
                     8889999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDLGSCSRFP LDSSTDFEKE QQQQQEMESS SLFVEKEHMF DKVVTPSDVG KLNRLVIPKQ  60
HAEKYFPLDS SSNDKGLLLN FEDRCGKSWR FRYSYWTSSQ SYVMTKGWSR FVKEKRLDAG  120
DIVSFQRGLG HLGKDRFFID WRRRPPHAPL DTPITFHHNH HLHGGGAAGV AQIPHHFHLH  180
QWTPVATPLS LPRDHLLHLP QNNSNHNNLT LFHNDNFNLY NHHYHHHYLN PPPIQDGGGS  240
PSVLYHLRSA PPPPPVAVGG GGRGIGKGAA SSKTLRLFGV NMECAVSEDQ SDDECDITTS  300
TTTMSPQFRV YDGMPMSIPI RMPNSNNKLT TDFFNKGKSS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.19e-64B3 family protein