PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941776.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16428 Da PI: 10.1495

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941776.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.3	4.7e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkly+ys+ XP_022941776.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLYDYST 59 8***********************************************96 PP
2	K-box	64	5.6e-22	78	141	8	69
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + ++ ++ + +++e+a Lk++++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le++Le slk +R K XP_022941776.1 78 QlmNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSVKDLQNLENKLEMSLKGVRVEK 141 234678899****************************************************877 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLYDYSTT 60 SIRSITDRYY KVKEEQNQLM NSVSELQFWK REAAALKQQL HYLQECHRQL MGEELSGLSV 120 KDLQNLENKL EMSLKGVRVE KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	6e-73	MIKC_MADS family protein