PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022941919.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 376aa MW: 43681.4 Da PI: 4.7259

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022941919.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	99.4	3.4e-31	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F+kklye+++d++++++i w +++sf ++d ++f ++LpkyFkhsnf+SF+RQLn+YgF+k++++ w F+ + F kg+k+ll++ XP_022941919.1 16 FVKKLYEMVDDDATNSIIAWRPTEDSFTIVDITQFCVHMLPKYFKHSNFSSFMRQLNIYGFRKIDTDC---------WVFATDGFIKGQKHLLKN 101 9******************999************************************9987.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k+ XP_022941919.1 102 IYRRKN 107 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MVKSAAERQG STVAPFVKKL YEMVDDDATN SIIAWRPTED SFTIVDITQF CVHMLPKYFK 60 HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ 120 DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN 180 QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP 240 LDELPANLLP AVSGMGKQQE SDPFPDGMKD FFLNSDFMKV LLDEKLCLDN HTQFVLPDVQ 300 DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ 360 MEKCETFEMS QRLDES

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MVKSAAERQG STVAPFVKKL YEMVDDDATN SIIAWRPTED SFTIVDITQF CVHMLPKYFK  60
HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ  120
DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN  180
QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP  240
LDELPANLLP AVSGMGKQQE SDPFPDGMKD FFLNSDFMKV LLDEKLCLDN HTQFVLPDVQ  300
DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ  360
MEKCETFEMS QRLDES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-94	HSF family protein