PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942010.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 322aa MW: 35246.5 Da PI: 8.2471

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942010.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.5e-54	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l+pGfrFhPtdeel+ +yL kkv +++++ +i+ vd++k+ePwdLp+k+ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_022942010.1 14 LAPGFRFHPTDEELIAHYLLKKVLDSHFSS-PAIAYVDLNKSEPWDLPEKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSS 107 579**********************999.78***********8888899**********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+grapkg+kt+Wvmhe++l XP_022942010.1 108 kTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFHL 141 56778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MDSSVHRSSN NGYLAPGFRF HPTDEELIAH YLLKKVLDSH FSSPAIAYVD LNKSEPWDLP 60 EKAVMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREITSSKTN SVVGMKKTLV 120 FYTGRAPKGQ KTHWVMHEFH LAGKFAYHFL SAASSKDEWV ISRVFKKTSA AMHGGVMKKT 180 RGDPEPTSPS SVSLPPLLDS SPYLSAAADT SISTSAFANR DGSSLDDQRE HQLHVTCFST 240 NNLSYPAASF PAGGGHNLSV SAFPNLRSIQ ENLQAPFFSP VSPPLVHLLS GAADVDGCGG 300 APSPEDSRTM GSADLGAYMW TF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	2e-91	NAC family protein